Twelve pills for Christmas…

This Christmas I sent a care package of various supplements to a CFS friend that is on SSI and having been having increasing problems. He is interested in my gut-bacteria model of CFS as well as needing neurological improvement.

Before sending the pills, I told him that he must run them past his medical professional before starting. There are always drug interactions etc. that are risks…

Often medical professional have no idea of what sequence to add various pills in. I tend to keep to the “no more than one new item every day (or even three days)” philosophy.  To assist his medical professional, I put together the sequence that seems to make the most sense (and why) below. It may be of interest to other readers’ discussions with their medical professionals. The goal is to have high risk of herx items later in the list and items likely to reduce inflammation (degree of herx) earlier in the list. The intent is not to send him to a herx-hell too fast!

4Olive Leaf ExtractProtects brain, will impact some gut bacteria

Day Supplement Why
1 Prepare water using chlorine water purification tablets. (i.e. Katadyn Micropur tablets or equivalent) It will reduce several over growths. Some CFS patients have found it effective to reduce symptoms
2 Boswellia Reduce inflammation, improves blood flow, protects brain
3 Piracetam Improves blood flow, protects brain
4 Licorice (in warm milk if possible) Anti-inflammatory, alters gut bacteria
5 Aswanganda Anti-inflammatory, protects brain, reduces some gut bacteria
6 Magnesium Malate Encourage growth of some low bacteria, reduce inflammation
7 EDTA (herx risk: ♦) Breaks down biofilms
8 NAC (herx risk: ♦) Breaks down biofilms
9 Olive Leaf Extract (herx risk: ♦♦) Protects brain, will impact some gut bacteria
10 Tulsi (herx risk: ♦♦♦) Effective against one of the overgrowth bacteria
11 Neem (herx risk: ♦♦♦) Effective against another of the overgrowth bacteria
12 Grape Seed Extract Reduce coagulation

Notes:

  • For chlorine tablets, after mixing 1 tablet in 1 qt of water, allow it to rest in a dark cupboard for 30 minutes. Keep it in a dark cupboard so minimize the breakdown.
  • The ideal on day 13 or after a 7-10 pulse has ended, would be the addition of Mutaflor, Lacobacillus Reuteri, etc

I expect him to have a good headache and other signs of herx as he goes through the list (after approval by medical professional). When a herx starts, it is often best to stop adding more stuff until the herx ebbs (usually 4-7 days). If the herx gets too severe, stop the last item and wait 4 days before starting the next item. Often the herx will be a lot less severe on a second round/pulse.

Crohn’s Disease: Herbs and Spices for E.Coli Overgrowth

My earlier post on Crohn’s Disease(CD) had some feedback asking for more herbs that are effective against Escherichia coli. This is not what a CFS patient want to use – their E.Coli levels are very low. This feedback was coming from Crohn’s patients because they could not tolerate some of the herbs. A person with Crohn’s that tried Mutaflor – Escherichia coli Nissle 1917 – (up to 3 capsules/day) reports much better symptoms and greater food tolerance since starting the Mutaflor. The Mutaflor replaces some of the bad E.Coli, but does not appear to be able to eliminate all of them.  For some people, several weeks or months of Mutaflor may be needed before trying/tolerating the herbs. Sorry, no overnight cures.

The key for this approach is simple:

“Of all invasive bacterial strains in CD 98.9% were identified as E. coli as opposed to 42.1% in UC and 2.1% in normal controls.” http://www.ncbi.nlm.nih.gov/pubmed/17660846

We want to nuke the invasive strains and immediately repopulate with Mutaflor.

The following table should be helpful. I have ignored the extract method, I will leave that to advance herbalists. Some may require a visit to an oriental herbalist to obtain. All of these should be reviewed by a knowledgeable medical professional before starting.

Latin Name Common Name PubMed Article(s)
Zingiber officinale Ginger Root (inji root) [A]
Punica granatum Pomegranate [A]
Terminalia chebula  haritaki [A]
Withania somnifera Ashwanganda [B]
Epilobium angustifolium Fireweed [C]
Salvia Plebeia [D]
Rosmarinus officinalis Rosemary [E]
Scutellaria baicalensis Chinese/Baikal Skullcap [F]
Trianthema decandra  gadabani [G]

 

It should be noted that resistance to herbs have been reported by repeat use [Study], thus two weeks on two followed by a different pair may be a good approach. Taking one capsule of Mutaflor (separated by 12 hours) may be beneficial. E.Coli is viewed as the most resistive of all bacteria [Study].  Less than 10% of herbs and spices will impact E.Coli – so make sure there is a study supporting the use of any herb, and not personal opinion. Because a herb work for a different bacteria, does not mean it will work for E.Coli.

Twelve pills for Christmas…

This Christmas I sent a care package of various supplements to a CFS friend that is on SSI and having been having increasing problems. He is interested in my gut-bacteria model of CFS as well as needing neurological improvement.

Before sending the pills, I told him that he must run them past his medical professional before starting. There are always drug interactions etc. that are risks…

Often medical professional have no idea of what sequence to add various pills in. I tend to keep to the “no more than one new item every day (or even three days)” philosophy.  To assist his medical professional, I put together the sequence that seems to make the most sense (and why) below. It may be of interest to other readers’ discussions with their medical professionals. The goal is to have high risk of herx items later in the list and items likely to reduce inflammation (degree of herx) earlier in the list.

Day Supplement Why
1 Prepare water using chlorine water purification tablets. (i.e.NaDCC) It will reduce several over growths. Some CFS patients have found it effective to reduce symptoms
2 Boswellia Reduce inflammation, improves blood flow, protects brain
3 Piracetam Improves blood flow, protects brain
4 Olive Leaf Extract Protects brain, will impact some gut bacteria
5 Licorice (in milk) Anti-inflammatory, alters gut bacteria
6 Aswanganda Anti-inflammatory, protects brain, reduces some gut bacteria
7 Magnesium Malate Encourage growth of some low bacteria, reduce inflammation
8 EDTA Breaks down biofilms
9 NAC Breaks down biofilms
10 Tulsi Effective against one of the overgrowth bacteria
11 Neem Effective against another of the overgrowth bacteria
12 Grape Seed Extract Reduce coagulation

I expect him to have a good headache and other signs of herx as he goes through the list (after approval by medical professional). When that happens, it is often best to stop adding more stuff until the herx ebbs.

Yes, we have no bananas! – Weight Gain from Enterobacter cloacae

I came across an article in New Scientist (22/29 December 2012, p.13) today dealing with the relationship of weight gain and Enterobacteria.  A 175 kilo patient dropped 51 kg by going on a special diet. Before the diet, Enterobacteria was 35% of the gut bacteria, after the diet, undetectable (Enterobacteriaceae went from 13% to 0.3%). The full article is here [PubMed].  When this bacteria (Enterobacter cloacae B29) was added to germ-free mice, “the expression of the tumor necrosis factor-alpha, interleukin-1β, interleukin-6, I kappa B kinase epsilon and Toll-like receptor 4 pro-inflammatory genes increased significantly” – in other words, CFS-like inflammation. The interesting aspect is that with CFS, patients either go rail thin, or beach-ball round over time regardless of calorie intake.

This bacteria is resistant to many antibiotics[PubMed] with ciprofloxacin appearing to be the most effective.

I found one study of unripe papaya being effective against Enterobacter cloacae. Other studies (items are not easily obtained)

I was unable to find any easy to obtain herbs that are documented to be effective (I have written the authors of the above article for details on the traditional Chinese medicinal foods that were used).

No Bananas Please!

I found an interesting study where both the peel and the pulp of bananas increased the growth of ” Escherichia coli O157:H7, Shigella flexneri, Enterobacter cloacae and Salmonella typhimurium, as well as two non-pathogenic E. coli strains”.

The exception is if you are a skinny as a rail CFS patient, then you want to encourage E.Coli…

This study found norepinephrine(a usual stress produced chemical) also appears to encourage Enterobacter cloacae. Hence weight gain as a result of stress may be bacterial in origin.

More reading..

Now for something complete different – 2 : Parkinson’s Disease

I have been requested to look at the possibility that Parkinson’s Disease (PD) may also be a stable dysfunction gut bacteria. We know from PubMed, the biodiversity of gut bacteria decreases with age. We also read that neurological and behavior changes can be associated with variation in gut bacteria…. So the concept is worth running up the flag pole!

Doing a little searching, we find:

  • [May 2011] Helicobacter pylori is associated with Parkinson’s Ref 1,2 – it is interesting to note that this only occurred with middle-aged mice. Does not occur with younger mice.
  • There is an ongoing trial “. The investigators are studying changes in the normal population of gut flora and in intestinal permeability and their associations with early Parkinson’s Disease.”
  • [2011] Parkinson’s patients are 8 times more likely to have small intestinal bacterial overgrowth
  • [2011]  Parkinson’s patients have abnormal intestinal permeability.

Buried on the internet, was a very interesting paper, “Bacterial Neurotoxicity and Parkinson’s Disease” written as a result of a grant from National Institutes of Environmental Health Sciences. In summary, it states

“high prevalence of PD found in people who work in the soil or drink well water, these patients may be exposed to factors excreted by  soil bacteria”

The paper Identified two bacteria that “fit the bill”

  • Streptomyces lividans
  • Streptomyces venezuelae

This study is cited in Parkinson’s Disease and Movement Disorders: Laboratory Management and … By Joseph J. Jankovic, Eduardo Tolosa, 2007. A further 2009 study is available on PubMed.

However, Streptomyces platensis produces lergotrile, which alleviate tremors in PD. In other words, there appear to be both friend and foe within the same family. Streptomyces avelmitilis also appears to be helpful according to a 2009 study.

One logical exploration is to examine antibiotics that kill Streptomyces. Unfortunately, this family of over 500 species is often used to produce antibiotics and are rarely associated with infections. They produce over two-thirds of the clinically useful antibiotics of natural origin.

The only recognized infections are due to:

  • Streptomyces somaliensis
  • Streptomyces sudanensis

There is a little treatment information available for other species in this family:

  • novobiocin [One study suggesting usefulness], gentamycin [no studies] and doxycycline [2011 Study]
    • Doxycycline appears to produce positive results in several studies, 1, 2. the related monocycline is an established neuroprotective.
  • Rifampicin [1989 Study] – also a neuroprotective and suggested for PD in multiple papers
  • amikacin and linezolid [2008 Study] – in this case, a brain abscess was caused by this bacteria. No studies of either with PD.

Bottom Line

Studies are in progress to determine how gut bacteria is altered. Evidence indicate that it is.  Helicobacter pylori is an easy one to test for and treat when found. There is a only one ghostly finger point at a specific bacteria family: Streptomyces, a family that is usually deemed to be very friendly and gives us many antibiotics. Of course, there may be a dark side to this family, a few species that may produce toxins that results in PD instead of unhealthy bacteria. There are a few antibiotics identified above which could help — but no human studies have been done….

Doxycycline/minocycline and rifampicin are two likely candidates on the basis of both being neuroprotectives alone.

 Doxycycline/minocycline and rifampicin are two likely candidates on the basis of both being neuroprotectives alone. Minocycline is not negatively spoken of in this 2006 News Article. Cochrane reported in 2011: “One of the trials reported a significant increase in levodopa absorption and improvement in motor symptoms when antibiotics were used to eradicate H pylori.” — it is unclear if this improvement would also been seen with PD patients are do not have H pylori.
Thus PD as an illness that may have a significant co-factor being dysfunctional gut-bacteria (possibly with Streptomyces species) appears to be a viable hypothesis. As mentioned in earlier posts, the use of Lactobacillus probiotics are unlikely to be of help.
PD are high in Iron (like CFS patients are low in B12). This may point to a specific bacteria overgrowth (or undergrowth of those that retain surplus iron) – which one(s) are significant for iron in the human gut appears to be unknown, although this1968 paper could provide some insight (or not).