This is from donated samples on microbiome prescription that have been annotated with diagnosis or symptoms. See this post for how these were calculated. All items are with P < 0.005 (10 times more significant than many published studies).
| Bacteria Name | Rank | Shift |
| Deferribacteres | phylum | Seen too often |
| Thermodesulfobacteria | phylum | Seen too often |
| Hyphomicrobium aestuarii | species | Seen too often |
| Rhizobiaceae | family | Seen too often |
| Gluconobacter | genus | Seen too often |
| Erwinia oleae | species | Not seen as often as expected |
| Actinobacillus porcinus | species | Not seen as often as expected |
| Prevotella micans | species | Not seen as often as expected |
| Prevotella oulorum | species | Not seen as often as expected |
| Prevotella shahii | species | Not seen as often as expected |
| Thiocapsa | genus | Seen too often |
| Pediococcus argentinicus | species | Seen too often |
| Peptostreptococcus stomatis | species | Seen too often |
| Streptococcus mutans | species | Seen too often |
| Sporosarcina pasteurii | species | Seen too often |
| Lactobacillus acidophilus | species | Seen too often |
| Erysipelothrix inopinata | species | Seen too often |
| Bifidobacterium angulatum | species | Not seen as often as expected |
| Bifidobacterium catenulatum | species | Not seen as often as expected |
| Bifidobacterium ruminantium | species | Seen too often |
| Bifidobacterium catenulatum subsp. kashiwanohense | subspecies | Not seen as often as expected |
| Corynebacterium glucuronolyticum | species | Seen too often |
| Haploplasma | genus | Seen too often |
| Acholeplasma hippikon | species | Seen too often |
| Propionigenium modestum | species | Seen too often |
| Levilactobacillus | genus | Seen too often |
| Pediococcus | genus | Seen too often |
| Roseospira | genus | Seen too often |
| Caloramator indicus | species | Seen too often |
| Caloramator viterbiensis | species | Seen too often |
| Hyphomicrobium | genus | Seen too often |
| Prosthecobacter fluviatilis | species | Seen too often |
| Tetragenococcus halophilus | species | Not seen as often as expected |
| Acidaminobacter hydrogenoformans | species | Seen too often |
| Thermodesulfobacteriales | order | Seen too often |
| Deferribacterales | order | Seen too often |
| Heliorestis baculata | species | Seen too often |
| Parapedobacter | genus | Seen too often |
| Mogibacterium vescum | species | Seen too often |
| Collinsella tanakaei | species | Seen too often |
| Absiella | genus | Seen too often |
| Pseudomonas viridiflava | species | Not seen as often as expected |
| Finegoldia magna | species | Seen too often |
| Sphingobium abikonense | species | Seen too often |
| Anaerococcus tetradius | species | Seen too often |
| Cetobacterium ceti | species | Seen too often |
| Peptostreptococcus | genus | Seen too often |
| Thermodesulfobacteriaceae | family | Seen too often |
| Thermodesulfatator | genus | Seen too often |
| Deferribacteraceae | family | Seen too often |
| Deferribacteres | class | Seen too often |
| Thermodesulfobacteria | class | Seen too often |
| Cetobacterium | genus | Seen too often |
| Propionigenium | genus | Seen too often |
| Prosthecobacter | genus | Seen too often |
| Roseobacteraceae Pujalte et al. 2014 | family | Seen too often |
| Desulfonatronovibrio | genus | Seen too often |
| Thermodesulfatator atlanticus | species | Seen too often |
| Aminiphilus circumscriptus | species | Seen too often |
| Olivibacter terrae | species | Seen too often |
| Parapedobacter koreensis | species | Seen too often |
| Acidaminobacter | genus | Seen too often |
| Bifidobacterium kashiwanohense PV20-2 | strain | Not seen as often as expected |
| Aminiphilus | genus | Seen too often |
| Haploplasma cavigenitalium | species | Seen too often |
| Prevotella copri | species | low in ME/CFS |
| Prevotella | genus | low in ME/CFS |
| Sporolactobacillaceae | family | low in ME/CFS |
| Sporolactobacillus putidus | species | low in ME/CFS |
| Sporolactobacillus | genus | low in ME/CFS |
| Prevotellaceae | family | low in ME/CFS |
| Firmicutes | phylum | high in ME/CFS |
| Blautia | genus | high in ME/CFS |
| Cetobacterium ceti | species | high in ME/CFS |
| Cetobacterium | genus | high in ME/CFS |
| Bifidobacterium tsurumiense | species | low in ME/CFS |
| Propionigenium | genus | high in ME/CFS |
| Propionigenium modestum | species | high in ME/CFS |
| Phocaeicola plebeius | species | low in ME/CFS |
| Eubacteriales | order | high in ME/CFS |
| Clostridia | class | high in ME/CFS |
| Catonella morbi | species | high in ME/CFS |
| Catonella | genus | high in ME/CFS |
| Bifidobacterium gallicum | species | low in ME/CFS |
| Bacteroides rodentium | species | high in ME/CFS |
| Cerasicoccus | genus | low in ME/CFS |
| Gallionellaceae | family | low in ME/CFS |
| Gallionella | genus | low in ME/CFS |
| Aggregatibacter aphrophilus | species | low in ME/CFS |
| Cerasicoccus arenae | species | low in ME/CFS |
| Filifactor alocis | species | low in ME/CFS |
| Desulfotomaculum defluvii | species | high in ME/CFS |
| Collinsella intestinalis | species | high in ME/CFS |
| Anaerolineae | class | high in ME/CFS |
| Bifidobacterium bifidum | species | low in ME/CFS |
| Clostridium frigoris | species | low in ME/CFS |
| Desulfotomaculum | genus | high in ME/CFS |
| Hahella | genus | low in ME/CFS |
| Desulfovibrio | genus | low in ME/CFS |
| Megamonas | genus | low in ME/CFS |
| Lachnospiraceae | family | high in ME/CFS |
| Bifidobacterium angulatum | species | low in ME/CFS |
| Acinetobacter antiviralis | species | low in ME/CFS |
| Syntrophomonas sapovorans | species | low in ME/CFS |
| Pseudomonas viridiflava | species | low in ME/CFS |
| Chloroflexi | phylum | high in ME/CFS |
| Puniceicoccaceae | family | low in ME/CFS |
| Oribacterium | genus | low in ME/CFS |
| Geobacter | genus | high in ME/CFS |
| Geobacteraceae | family | high in ME/CFS |
| Terrabacteria group | clade | high in ME/CFS |
| Campylobacter concisus | species | low in ME/CFS |
| Fusobacteriaceae | family | high in ME/CFS |
| Opitutae | class | low in ME/CFS |
| Fusobacteriales | order | high in ME/CFS |
| Fusobacteriia | class | high in ME/CFS |
| Fusobacteria | phylum | high in ME/CFS |
| Emticicia oligotrophica | species | low in ME/CFS |
| Emticicia | genus | low in ME/CFS |
| Megamonas funiformis | species | low in ME/CFS |
| Puniceicoccales | order | low in ME/CFS |
| Thiorhodococcus | genus | low in ME/CFS |
| Granulicella | genus | low in ME/CFS |
| Allohahella | genus | low in ME/CFS |
| Allohahella antarctica | species | low in ME/CFS |
| Spirosomaceae | family | low in ME/CFS |
| Gallionella ferruginea | species | low in ME/CFS |
| Oribacterium sinus | species | low in ME/CFS |
| Granulicella tundricola | species | low in ME/CFS |
| Prevotella paludivivens | species | low in ME/CFS |
| Legionellales | order | high in ME/CFS |
| Caldilinea tarbellica | species | high in ME/CFS |
| Caldilineales | order | high in ME/CFS |
| Caldilineaceae | family | high in ME/CFS |
| Caldilinea | genus | high in ME/CFS |
| Caldilineae | class | high in ME/CFS |
| Moorella | genus | low in ME/CFS |
| Cytophagaceae | family | low in ME/CFS |
| Legionellaceae | family | high in ME/CFS |
| Anaeroplasmataceae | family | low in ME/CFS |
| Anaeroplasma | genus | low in ME/CFS |
| Anaeroplasmatales | order | low in ME/CFS |
CFS Remission 