In coding up a website to make analysis easier, I had to figure out what uBiome deems to be normal. Getting a standard for a microbiome is very fuzzy and any standard can be challenged endlessly.
With CFS/FM/IBS, we rather work with poor assumptions instead of waiting further generations for a better answer to occur(whether that is possible is also debatable!).
The following are my inferences that uBiome may be using.
The Phylum or Top Level
| Firmicutes | 55.133% |
| Bacteroidetes | 26.704% |
| Acidobacteria | 4.302% |
| Proteobacteria | 3.193% |
| Verrucomicrobia | 2.737% |
| Fusobacteria | 2.209% |
| Cyanobacteria | 1.989% |
| Tenericutes | 1.347% |
| Spirochaetes | 1.012% |
| Synergistetes | 0.413% |
| Fibrobacteres | 0.379% |
| Lentisphaerae | 0.294% |
| Candidatus Saccharibacteria | 0.283% |
| Euryarchaeota | 0.004% |
The Class or Second Layer
| Clostridia | 48.080% |
| Bacteroidia | 25.455% |
| Actinobacteria | 4.229% |
| Verrucomicrobiae | 2.466% |
| Gammaproteobacteria | 2.320% |
| Alphaproteobacteria | 2.318% |
| Negativicutes | 2.266% |
| Fusobacteriia | 2.113% |
| Bacilli | 1.970% |
| Acidobacteriia | 1.543% |
| Mollicutes | 1.296% |
| Betaproteobacteria | 1.160% |
| Erysipelotrichia | 0.963% |
| Spirochaetia | 0.949% |
| Epsilonproteobacteria | 0.683% |
| Flavobacteriia | 0.462% |
| Synergistia | 0.395% |
| Deltaproteobacteria | 0.367% |
| Fibrobacteria | 0.363% |
| Opitutae | 0.337% |
| Lentisphaeria | 0.265% |
| Methanobacteria | 0.004% |
The Order or Third Layer
| Clostridiales | 39.69% |
| Bacteroidales | 20.81% |
| Sphingomonadales | 3.48% |
| Rhizobiales | 3.22% |
| Aeromonadales | 2.57% |
| Verrucomicrobiales | 2.03% |
| Enterobacteriales | 1.90% |
| Selenomonadales | 1.87% |
| Actinomycetales | 1.85% |
| Fusobacteriales | 1.74% |
| Acidobacteriales | 1.70% |
| Coriobacteriales | 1.70% |
| Pseudomonadales | 1.54% |
| Lactobacillales | 1.47% |
| Rhodospirillales | 1.46% |
| Bifidobacteriales | 1.42% |
| Anaeroplasmatales | 1.27% |
| Bacillales | 1.18% |
| Rhodocyclales | 1.18% |
| Burkholderiales | 0.91% |
| Neisseriales | 0.85% |
| Erysipelotrichales | 0.79% |
| Vibrionales | 0.67% |
| Caulobacterales | 0.63% |
| Campylobacterales | 0.56% |
| Pasteurellales | 0.54% |
| Spirochaetales | 0.53% |
| Flavobacteriales | 0.38% |
| Synergistales | 0.33% |
| Fibrobacterales | 0.30% |
| Puniceicoccales | 0.28% |
| Desulfovibrionales | 0.27% |
| Thermoanaerobacterales | 0.27% |
| Acholeplasmatales | 0.26% |
| Syntrophobacterales | 0.21% |
| Mycoplasmatales | 0.14% |
| Methanobacteriales | 0.00% |
The Family or Fourth Layer
| Lachnospiraceae | 19.379% |
| Bacteroidaceae | 13.985% |
| Ruminococcaceae | 10.748% |
| Moraxellaceae | 3.231% |
| Sphingomonadaceae | 3.049% |
| Prevotellaceae | 2.983% |
| Hyphomicrobiaceae | 2.375% |
| Porphyromonadaceae | 2.323% |
| Clostridiaceae | 1.929% |
| Verrucomicrobiaceae | 1.781% |
| Clostridiales Family XI. Incertae Sedis | 1.763% |
| Enterobacteriaceae | 1.666% |
| Fusobacteriaceae | 1.599% |
| Rikenellaceae | 1.571% |
| Staphylococcaceae | 1.546% |
| Acidobacteriaceae | 1.486% |
| Coriobacteriaceae | 1.484% |
| Veillonellaceae | 1.270% |
| Bifidobacteriaceae | 1.244% |
| Corynebacteriaceae | 1.190% |
| Propionibacteriaceae | 1.188% |
| Rhodospirillaceae | 1.184% |
| Anaeroplasmataceae | 1.131% |
| Acidaminococcaceae | 1.002% |
| Peptostreptococcaceae | 0.964% |
| Rhodocyclaceae | 0.904% |
| Enterococcaceae | 0.881% |
| Brucellaceae | 0.855% |
| Bacillaceae | 0.818% |
| Sutterellaceae | 0.766% |
| Neisseriaceae | 0.747% |
| Streptococcaceae | 0.697% |
| Erysipelotrichaceae | 0.684% |
| Carnobacteriaceae | 0.678% |
| Vibrionaceae | 0.590% |
| Mycobacteriaceae | 0.590% |
| Pseudomonadaceae | 0.588% |
| Aeromonadaceae | 0.562% |
| Caulobacteraceae | 0.552% |
| Lactobacillaceae | 0.542% |
| Micrococcaceae | 0.475% |
| Pasteurellaceae | 0.474% |
| Brevibacteriaceae | 0.445% |
| Campylobacteraceae | 0.432% |
| Leuconostocaceae | 0.415% |
| Methylobacteriaceae | 0.415% |
| Comamonadaceae | 0.411% |
| Actinomycetaceae | 0.384% |
| Flavobacteriaceae | 0.331% |
| Brachyspiraceae | 0.309% |
| Aerococcaceae | 0.295% |
| Synergistaceae | 0.285% |
| Burkholderiaceae | 0.285% |
| Christensenellaceae | 0.251% |
| Desulfovibrionaceae | 0.240% |
| Peptococcaceae | 0.235% |
| Acholeplasmataceae | 0.235% |
| Fibrobacteraceae | 0.218% |
| Victivallaceae | 0.191% |
| Planococcaceae | 0.176% |
| Oscillospiraceae | 0.167% |
| Clostridiales Family XIII. Incertae Sedis | 0.165% |
| Leptotrichiaceae | 0.156% |
| Mycoplasmataceae | 0.122% |
| Oxalobacteraceae | 0.121% |
| Eubacteriaceae | 0.105% |
| Caldicoprobacteraceae | 0.048% |
| Catabacteriaceae | 0.047% |
| Thermoanaerobacteraceae | 0.037% |
| Methanobacteriaceae | 0.003% |
The Genus or Fifth Layer
| Bacteroides | 11.76% |
| Faecalibacterium | 6.67% |
| Blautia | 6.48% |
| Roseburia | 4.02% |
| Alloprevotella | 2.66% |
| Megamonas | 2.53% |
| Subdoligranulum | 1.53% |
| Akkermansia | 1.53% |
| Pseudobutyrivibrio | 1.43% |
| Staphylococcus | 1.40% |
| Acinetobacter | 1.36% |
| Fusobacterium | 1.35% |
| Fusicatenibacter | 1.33% |
| Parabacteroides | 1.30% |
| Alistipes | 1.26% |
| Kluyvera | 1.25% |
| Anaeroplasma | 1.20% |
| Anaerostipes | 1.18% |
| Collinsella | 1.12% |
| Paraprevotella | 1.07% |
| Sarcina | 1.06% |
| Bifidobacterium | 1.05% |
| Thalassospira | 1.02% |
| Propionibacterium | 1.00% |
| Corynebacterium | 0.92% |
| Sutterella | 0.92% |
| Dorea | 0.79% |
| Enterobacter | 0.79% |
| Succiniclasticum | 0.78% |
| Anaerotruncus | 0.77% |
| Azospira | 0.77% |
| Lactobacillus | 0.76% |
| Phascolarctobacterium | 0.75% |
| Acidaminococcus | 0.75% |
| Tepidimonas | 0.75% |
| Prevotella | 0.75% |
| Enterococcus | 0.74% |
| Finegoldia | 0.72% |
| Peptoniphilus | 0.71% |
| Lachnospira | 0.70% |
| Asteroleplasma | 0.67% |
| Veillonella | 0.65% |
| Sphingomonas | 0.64% |
| Klebsiella | 0.64% |
| Gardnerella | 0.64% |
| Dialister | 0.64% |
| Neisseria | 0.63% |
| Anaerococcus | 0.62% |
| Catenibacterium | 0.61% |
| Dysgonomonas | 0.60% |
| Porphyromonas | 0.59% |
| Megasphaera | 0.59% |
| Barnesiella | 0.58% |
| Streptococcus | 0.56% |
| Cellulosilyticum | 0.53% |
| Rothia | 0.50% |
| Ochrobactrum | 0.50% |
| Bacillus | 0.50% |
| Mycobacterium | 0.50% |
| Pseudomonas | 0.47% |
| Aeromonas | 0.47% |
| Weissella | 0.46% |
| Intestinibacter | 0.44% |
| Clostridium | 0.44% |
| Pediococcus | 0.42% |
| Parasutterella | 0.39% |
| Butyrivibrio | 0.38% |
| Brevibacterium | 0.37% |
| Haemophilus | 0.37% |
| Campylobacter | 0.36% |
| Brevundimonas | 0.36% |
| Varibaculum | 0.33% |
| Cronobacter | 0.32% |
| Murdochiella | 0.32% |
| Parvimonas | 0.30% |
| Desulfovibrio | 0.29% |
| Actinobacillus | 0.28% |
| Mogibacterium | 0.27% |
| Mobiluncus | 0.27% |
| Brachyspira | 0.26% |
| Romboutsia | 0.26% |
| Erysipelatoclostridium | 0.26% |
| Methylobacterium | 0.25% |
| Abiotrophia | 0.25% |
| Peptostreptococcus | 0.24% |
| Ralstonia | 0.24% |
| Asaccharospora | 0.24% |
| Flavobacterium | 0.23% |
| Comamonas | 0.23% |
| Fastidiosipila | 0.23% |
| Anaerofilum | 0.22% |
| Granulicatella | 0.22% |
| Johnsonella | 0.21% |
| Aggregatibacter | 0.21% |
| Candidatus Saccharimonas | 0.20% |
| Pasteurella | 0.20% |
| Odoribacter | 0.19% |
| Eisenbergiella | 0.19% |
| Acholeplasma | 0.19% |
| Flavonifractor | 0.19% |
| Delftia | 0.19% |
| Butyricicoccus | 0.19% |
| Robinsoniella | 0.18% |
| Lactococcus | 0.18% |
| Fibrobacter | 0.18% |
| Gemella | 0.18% |
| Butyricimonas | 0.18% |
| Devosia | 0.17% |
| Turicibacter | 0.17% |
| Coprobacillus | 0.16% |
| Terrisporobacter | 0.16% |
| Victivallis | 0.16% |
| Atopobium | 0.16% |
| Gallicola | 0.16% |
| Anaerobacter | 0.16% |
| Fretibacterium | 0.16% |
| Moryella | 0.16% |
| Scardovia | 0.15% |
| Oribacterium | 0.15% |
| Cloacibacillus | 0.15% |
| Dielma | 0.15% |
| Pantoea | 0.15% |
| Enterorhabdus | 0.15% |
| Coprobacter | 0.15% |
| Anaerosporobacter | 0.14% |
| Actinomyces | 0.14% |
| Oscillibacter | 0.14% |
| Solobacterium | 0.13% |
| Peptoclostridium | 0.13% |
| Shuttleworthia | 0.13% |
| Bilophila | 0.13% |
| Leptotrichia | 0.13% |
| Leuconostoc | 0.12% |
| Candidatus Stoquefichus | 0.12% |
| Negativicoccus | 0.12% |
| Senegalimassilia | 0.11% |
| Mitsuokella | 0.11% |
| Slackia | 0.107% |
| Sedimentibacter | 0.106% |
| Eggerthella | 0.104% |
| Ureaplasma | 0.103% |
| Oscillospira | 0.100% |
| Marvinbryantia | 0.099% |
| Parasporobacterium | 0.097% |
| Eubacterium | 0.095% |
| Papillibacter | 0.095% |
| Pseudoflavonifractor | 0.091% |
| Peptococcus | 0.091% |
| Acetitomaculum | 0.089% |
| Intestinimonas | 0.081% |
| Lactonifactor | 0.070% |
| Hespellia | 0.063% |
| Allisonella | 0.063% |
| Anaerovorax | 0.062% |
| Anaerobacillus | 0.060% |
| Parvibacter | 0.051% |
| Anaerobacterium | 0.050% |
| Candidatus Soleaferrea | 0.050% |
| Hydrogenoanaerobacterium | 0.050% |
| Caldicoprobacter | 0.048% |
| Adlercreutzia | 0.045% |
| Lachnobacterium | 0.043% |
| Herbaspirillum | 0.041% |
| Gordonibacter | 0.041% |
| Acetivibrio | 0.040% |
| Catabacter | 0.040% |
| Anaerofustis | 0.037% |
| Holdemania | 0.034% |
| Sporobacter | 0.031% |
| Christensenella | 0.030% |
| Gelria | 0.030% |
| Acetanaerobacterium | 0.026% |
| Methanobrevibacter | 0.0022% |
| Howardella | 0.0011% |
| Bergeyella | 0.0010% |
| Paraeggerthella | 0.0005% |
| Methanosphaera | 0.0003% |
| Citrobacter | 0.0003% |
| Synergistes | 0.0002% |
| Catonella | 0.0002% |
| Denitratisoma | 0.0002% |
| Lautropia | 0.0001% |
| Capnocytophaga | 0.0001% |
| Aliivibrio | 0.0001% |
CFS Remission 