The first one is quiet and behind the scene. Ubiome reports E.Coli as it’s cousin Kluyvera (genus). I have updated the modifiers to apply E.Coli modifiers to Kluyvera (adding some 1300 more facts for the AI Engine to use). Most people will not see a change of suggestions due to this.
I have added in the ability to include common bacteria that you are missing into the analysis. This is on the advance page.

Use caution with this — the microbiome is a complex society. If you look at cities around the world you may find that 95% have homeless people. Trying to get homeless people for your town with no homeless people there — may not be the best path forward and have side-effects on your low crime rates.