Should CFS Patients use Lactobacillus Acidophilus? -Probably not

The studies behind this opinion may flies in the face of many physicians opinions (ND and MD) . The reason is the nature of the gut bacteria found in their guts. For many other conditions, Lactobacillus Acidophilus has proven health benefits. This is not the case with CFS.  I have read conference reports where CFS specialist have politely stated that they “have not seen any benefit from [normal] probiotics” — I would go further and suggest that it may be harmful to the CFS patient’s health.

The first study is Faecal Microbial Growth Inhibition in Chronic Fatigue/Pain Patients, presented at the AHMF conference in 1998 (The Manly Conference). The population of  E.Coli species was about 50% of normal in a sample of 27 patients. Richard Schloeffel reported finding extremely low E.Coli population in Two Case Studies of Successful Treatment of CFS/M.E. at the 2001 conference. Both Dr. Sarah Myhill (Wales, UK) and Dr. Kenny DeMeileir (Belgium) prescribes E.Coli probiotics for their patients.

This suggests that you want to encourage (healthy) E.Coli growth and avoid things that kill E.Coli.

Unfortunately Lactobacillus Acidophilus kills E.Coli as the following studies state:

and many more…  Lactobacillus Acidophilus (and some other species) are not the way to restore a CFS patient’s gut — if anything, it will keep it with low E.Coli populations.

Is a Niacin Flush an indicator of a specific bacteria (family) in the gut?

Last Friday I was outside putting in 100′ of fencing under a hot sun. Over the years, I have found that my first “heat exposure” of the summer has often resulted in heat diarrhea. I have long accepted that this was just my body resetting itself for a shift from winter cold to summer heat. How it resets has been a fuzzy question.

This time around I noticed something unusual, for the past many weeks I have had a 100% occurrence of a niacin flush after taking 500 mg of niacin. After the diarrhea, there was no flush. I have recently noticed a similar thing a few months ago: when I started taking Mutaflor, niacin flushes also disappeared and stayed away for months. My inference is that the flush is the result of a specific group of bacteria responding to niacin. If this group of bacteria is suppressed below a certain level, then no niacin flush occurs.

Which bacteria is the cause? Well, this will likely need some heavy PCR testings of flushers versus non-flushers being pushed through some fancy programs.

The flip side is whether this is seen in others, or can be simulated. Can we simulate the effect of flushing out a high percentage of the gut bacteria as happens with diarrhea? There is alternative colon cleanse which is reported to reduce symptoms with some CFS patients, but I have not seen any studies associating it with a change in niacin flush rates.

I am interested in hearing of any change of CFS symptoms (in specific niacin flushes) seen when patients have a colonoscopy. The usual process involves clearing out the colon and with this clearing out there may be a temporal alteration of gut bacteria.

On a similar line, I would be interested in hearing about changes of symptoms when a CFS patient acquires a case of diarrhea — in theory, there should be a lessening of CFS symptoms in some patients.

 

Health Rising Reposts: Microbiome and Coagulation

Original (with more comments) at: http://www.cortjohnson.org/blog/2013/06/20/microbiome-and-coagulation/

(Dave Berg’s theory that chronic fatigue syndrome, fibromyalgia and Gulf War Syndrome was associated with hypercoagulation or thickened blood that reduced oxygen and nutrient flow to the tissues appeared around 2000.  The theory attracted attention in the patient community but, like so many other theories, (eg. Chia’s enterovirus findings), received little attention from the research community. One small study (n=17) did not find evidence of hypercoagulation and that was it.  Ken Lassesen, however, benefited greatly from hypercoagulation therapy – Cort)

 “Overall, our findings suggest that clot formation can be a physiological weapon that helps to fight off pathogenic microbes. Indeed, activation of the blood coagulation process is probably an important and widespread antimicrobial defence mechanism.” Englemann

You know B and T-cells go ballistic when confronted with an infection. You may know that natural killer cells poke holes in infected cells or that monocytes into killing machines called macrophages when they ‘hear’ a pathogen is around, but you probably don’t know that immune cells called neutrophils actually thicken our blood to fight pathogens as well.

It turns out that upon encountering a microbe the innate immune system initiates an ‘unspecific inflammatory response’ which includes producing small blood clots that trap pathogens in the small blood vessels.  (What an interesting finding that is given Dr. DeMeirleirs assertion that the small blood vessels are already clamped down.. )

The Dave Berg/Hemex model for CFS and GWI involves an infection causing excessive coagulation due to a genetic or an acquired (often from organphosphates) coagulation defect.  A coagulation defect occurs when  a glitch in the complex coagulation process that allows coagulation products to remain and build up over time.

To give an analogy,  coagulation is more complex then burning fossil fuels. When we burn such fuels, carbon monoxide, carbon dioxide, water, sulphur dioxide (“bad eggs smell”), even arsenic are released into the air and local environment. Nature re-absorbs most of these chemicals — but if the right circumstances happen, one or more may start to accumulate and may cause a local health issue — it may be just smog or can even be toxic ground water.

The same is true for coagulation disorders, even more so.

From Wikipedia

Coagulation cascade

A coagulation defect means that one or more of the above arrows are missing or not working. For myself, it’s the links between Prothrombin(F II) –> Thrombin (F IIa) –> Fibrinogen –> Fibrin monomer. Correcting this particular defect required nothing more than adding turmeric and piracetam.  Another ME/CFS sufferer had problems with the Protein S link. This style of defect is rarely clinically significant(i.e. not worth exploring by MDs) unless there was something causing coagulation to keep  the process going and going at a higher level than normal. If a stroke occurs, then MDs will take action.

That something could be an infection or a toxin.

Dave Berg discovered this CFS connection because his lab specialized in testing for coagulation issues associated with infertility. (Accumulated coagulation products can interfer with the flow of oxygen to the fetus can cause an abortion.)  The treatment for this type of infertility is low doses of the body’s natural anticoagulant compound – heparin.

Similar to what happened with Rituximab 10 years later, the MD’s of these infertility patients noticed that many of their ME/CFS patients  got better when on heparin.  Many of these patients had thick enough blood to  receive a diagnosis of anti-phospholipid syndrome (APS) or Hughes Syndrome. Berg’s investigations lead to several publications before he retired.

The articles

For more on anti-phospholipid syndrome, ME/CFS and David Berg, check out “Conversations with David Berg” here.

So that’s the back story for this post…

Microbiome or Infection or Both?

Last time around, I was working off an infection causing model. In my readings, I found that the infections associated with a condition called Hughes Syndrome a.k.a. antiphospholipid antibody syndrome appear to be the same ones that are over-represented in the CFS population. My primary sources for APS infections was From “Hughes Syndrome Antiphospholipid Syndrome” Springer, 2000 (2nd printing 2002), editor M.A. Khamashta. Chapter 14, “Infections and Antiphospholipid Syndrome”(by A.E. Gharavi and S.S. Pierangeli), p. 135.

Chronic Fatigue Syndrome Associated Infections APS Infections
EBV (20% – 72%)  — 11 articles on pubmed Epstein-Bar Virus (EBV or HHV4)
VZV – 2 articles on pub med
Varicella zoster virus (VZV or HHV3 -chicken pox)
** Human Immunodeficiency virus (HIV)
HHV6 (25% – 58%) – 12 articles on pub med
Human Herpes Virus 6 (HHV6)
CMV (29%) – 4 articles on pub med
Cytomegalovirus (CMV) (HHV5)
Coxiella Burnetii (Rickettsia)(90% – 50%) – 6 articles on pub med
Coxiella Burnetii (Enteroviruses)
Lyme  – 2 articles on pub med
Lyme Disease (Rickettsia)
Mediterranean spotted fever (Rickettsia)
Mycoplasma (41% – 69%) – 13 articles on pub med
Mycoplasma
Anecdotal – see below
Leprosy
** Tuberculosis
** Syphilis
Parvovirus B Three articles on pub med
Parvovirus B
** Hepatitis
Chlamydia-Pneumonia (8%) – 4 articles on pub med
Chlamydia-Pneumonia – 3 articles on pub med
Human Enteroviruses (32% – 82%) 2 articles on pub med

The bottom line is simple: infections known to cause APS tend  to be over represented in ME/CFS patients. Most of the infections associated with ME/CFS are known to cause APS (with one exception)

The anecdotal case of Leprosy is interesting because I met someone at a Seattle ME/CFS Support group meeting who had and was successfully treated for Leprosy but came down with ME/CFS afterwards.  Retesting her for Leprosy indicated she was all clear. My assumption at that time was that a co-infection was responsible….  In 2012, however, a mathematical modelling article  changed my opinion totally….

This article, which ironically, dealt with the same type of machine learning I was doing at Amazon before my relapse, proposed  that an analysis of a person’s gut microbiome could provide greater than 90% accuracy in determining what infection/illness.  It suggested that each of the above  infections alters the gut microbiome for its own benefit and that the symptoms caused by the infection could, in some cases, be due  to the altered microbiome – not the infection, per se. This article suggested that sometime in the future, your family MD may ask you to bring in a stool sample in order to figure out what’s wrong the matter with you!   .

Then another mathematical modelling study, found that the longer that a person has an infection, the more likely that the microbiome will stay in its altered state. That is, the microbiome associated with the infection will persist (and thus accounts for the ease of re-infection for some diseases). This altered / unhealthy microbiome will keep pumping out signal chemicals causing coagulation and other symptoms without the infection being present.

You may test negative for every one of the infections above and still have the symptoms!

This’hit and run’ theory in which a pathogen hits, does its damage by altering the homeostasis of an organism, and then disappears, is prevalent one in ME/CFS given the difficulty finding active virus/bacterial infections in many people with infectious onset. It suggested to me that the search of an infection causing CFS may be an ideological quest doom to failure.  It might be far better to look for evidence of chronic system dysregulation, and, for me, that system was the gut.

Ten years later, doctors are not ordering stool samples in order to find out what infection you have but based on my experience and my readings, I believe that an altered microbiome alone could account for many symptoms of chronic fatigue syndrome.  I am not saying that checking for the above infections should not be done — definitely they should (and if found treated), but that may be only part of the CFS engine. The other parts need to be addressed also.

In the next posts I will look at what what we know about the microbiome and how to alter it — we have sparse knowledge (unfortunately).

Health Rising Reposts: A PERSON WITH CHRONIC FATIGUE SYNDROME RECOVERS AND….A GUT SERIES BEGINS

(Ken Lassesen’s focus on the gut enabled him to recover from chronic fatigue syndrome. Over the next couple of months he’ll be exploring his understanding of the role the gut played for him on Health Rising.  Check out his website CFSRemission here. Please welcome Ken Lassesen to Health Rising. )

In 2012, while experiencing significant work stress from a new job at Amazon, I got a flu that sent me to the hospital. The result was the start of my third onset of ME/CFS. Yes, third.  You may say — no one recovers, so how can you have recovered three times? You must have something else!

A short description of the symptoms (and tests results of each) may help

Onset #1 1972-73

Ken’s first bout with chronic fatigue syndrome occurred over 40 years. Two more followed several decades later. Ken fully recovered from all his bouts with ME/CFS.

Doing triple honors at University, working full time and family stress resulted in a sudden collapse of cognitive ability, tiredness and a persistent cough after a mild flu. This was before CFS or Lyme existed as a condition. The family MD (in his 60′s then) happened to have also treated my parents and grandparents and recognized some characteristics of my grandfather. The official diagnosis was “Antibiotic resistant walking pneumonia” which resulted in different antibiotics in high dosages for several months.

I also changed diet to lose weight, a high protein – no carbohydrates diet (which was effectively a gluten free diet before it was invented!).  He advised me that stress is a real contributor and to minimize it. It took almost 4-5 years before cognitive ability returned fully.  IMHO (in hindsight), I was lucky — the treatment was likely ideal.

Onset #2 2000-2001

I was working at Microsoft with a 90 minute commute each way and long days. The work situation had become very high stress (the boss causing it was later “asked” to leave Microsoft). Driving home, I fell asleep driving at a stop light and never went back to work. I was being treated by a Family Practice MD and had just done a regular checkout two weeks earlier that had zero problems.  I had cognitive collapse, physical fatigue, body pains, “stress cough”, low blood pressure, low body temperature, gray skin,  etc

Antibiotic induced gut flora changes may have played a significant role in one of Ken’s recoveries

I had the full range of conventional medical testing done with nothing apparent.  The MD was honest and said that she did not know what to do and literally asked me to research options. I found some very recently published works by Cecile Jadin and David Berg as the two most probable treatments given that both were reporting 70-80% remission. There was no clue as to how they could relate to the same condition! Without testing for infections, she agreed to put me on the same dosage of a tetracycline that she would prescribe for Acne. I improved and she became more willing to follow Jadin’s protocol.

I was a bad patient — I did not mention to her until 6 months later that I was badly herxing from the tetracycline (from readings, I knew what it was and knew that she may panic if I reported it to her… at times you need to control information flow to medical professionals.

(A Herxheimer effect or herx refers to a ‘healing crisis’ usually caused by the release of bacterial endotoxins during bacterial die-off.  The symptoms, which resemble those of sepsis, where first characterized in syphilis patients undergoing treatment.)

My blood was sent to Hemex labs for testing and I was indeed hyper-coagulated. Genetic testing  confirmed that I had a genetic factor  common to a population that my father’s family had come from. He had passed away from a stroke.

My treatment consisted of multiple antibiotics rotated monthly (using herx to determine if it was an effective one; a herx suggested it was) plus heparin and a variety of non-prescription anticoagulants. This time my recovery took a year.

Onset #3 2012

Similar situation as Onset #2: High stress company with dysfunctional management (my direct manager left Amazon about the same time I got the flu). Reduced blood pressure and body temperature, cognitive issues and cough were a few of the 40 symptoms I have listed in my notes.  When the symptoms first showed up I continuously increased anti-coagulants (which kept me work-functional) until I started to bruise easy.

I stopped the anticoagulants because of the very easy bruising and rapidly collapsed over the next week.  MRI results showed no problems (which is typical for CFS), however SPECT result matched those seen from Chronic Lyme and CFS (the radiologist described it as early (under-65) Alzheimer’s Disease).  I was having severe memory issues which many readers are likely familiar with. My conventional MD referred me to NDs, she did not want to/felt incapable of dealing with me.

I went to Dr. Kim Iller, who was familiar with Jadin’s work and willing to follow her protocol. She was working Dr. Marty Ross at that time. I tested positive for Chronic Lyme. As with the 2000 onset, I proceeded to read over 3000 pub med articles to make sure that there was not a better (more effective) treatment available.  I discovered some serious studies on gut bacteria and CFS and with Dr.Iller’s consent, went on to Mutaflor. A probiotic, Mutaflor caused the worst herx that I ever had in my life… but also rapid decrease of symptoms. It does not just kick-ass, it kicks-head; the worst headaches that I have ever had in my life…. Mutaflor is non-prescription in Canada and thus was easy to obtain crossing the border.  Recovery time was just 6 months until I was authorized to return to work.

Was This a Remission?

As described above  I’ve actually recovered from chronic fatigue syndrome three times, when most people never recover once.  Besides having a classic symptoms presentation, two objective measurements suggested that, once again,  I did have CFS:

  • My SPECT scan was abnormal in the same way that is commonly reported for CFS and for Chronic Lyme in PubMed articles. Later neuro-psychological testing found that I was in the outstanding range in most areas, but just “normal” for memory.  Memory issues continue to improve but are still present.
  • My vitamin 1,25D values were extremely high — the lab report actually stated that the measurements was done twice to be sure. This extreme 1,25D is seen with autoimmune diseases and with CFS.

With remission, my 1,25D levels dropped down to the normal range — suggesting that it was indeed a remission!

Each time there was a remission, it became faster, and I understood better the probable mechanisms involved.

The second time around, Dr. Jadin’s protocol using prescription antibiotics for over a year worked. This time, apart from some minocycline at the start,  there appeared to be no need for prescription antibiotics and I went into remission at 6-7 months.  The key this time was my focus on the  gastrointestinal system.

Several apparently random observations lead me to focus on the gut

  • Fecal transplants produced an immediate remission from CFS that lasted for at least a few months.
    • I’d corresponded with a patient that experienced this twice in Australia before this onset.
  • Long term antibiotics result in remission for a significant percentage of patients (but don’t work for others)
    • Each antibiotics impacts different gut flora, thus the randomness of results made sense.
  • At the start of this onset, I recognized, after clearing up other symptoms, that many of my core symptoms were gastrointestinal. These symptoms were “below” the radar on other onsets.

Once I was on sick leave I started reading every article on PubMed dealing with CFS, in particular, when remission was reported for some.  Two interesting and seemingly disconnected cases occurred; some people, oddly enough, recovered through the use of 85% chocolate and others from the use of licorice.  Obviously, this is not the way out for most people with ME/CFS but something did happen. My question then became what was in common with these observations???? My academic training is in modelling.

The conclusion was simple: all of these items result in changes of the gastrointestinal bacteria. Given that we all have different bacterial mixes I wondered if it was possible that these two people just happened to hit on the food that righted their bacterial flora.

The next step was to see if anyone has reported changes in  the gastrointestinal bacteria on a sample of CFS patients. A paper presented in 1998 in Australia and available [here] had. The study deal with only 6 family of bacteria, but the pattern was clear; the bacterial flora in this group of ME/CFS patients was profoundly disturbed.

Gut Flora in ME/CFS from an Australian Study

Family Controls CFS Patients
E.coli 92.3% 49%
Klebsiella/Enterobacter 0% 3%
Enterococcus spp. < 1% 24%
Bacteroides spp 92.8% 91%
Bifidobacterium spp, 7.1% 2%
Lactobacillus spp. < 1% 0%

My conclusion was that if you could change these bacteria back to the ranges seen with controls, CFS may disappear but how to do that?

Diet

I believe that a part of my first remission from CFS was going on a high protein, low/no carbohydrate diet for almost two years. This change was not as a treatment for CFS, but I believe that it helped correct my gut flora dysfunction. In animal studies, we find that it does alter gut bacteria[1] as well as human studies[2]. Even Dr. Mercola is in agreement[3].

Not surprisingly, your diet does effect your gut flora.

I recently read “The Lure of the Stone Age” by Marlene Zuk, an evolutionary biologist, in New Scientist. She is the author of a recent book, Paleofantasy: What Evolution Really Tells Us about Sex, Diet, and How We Live. Sometimes CFS patients will ascribe the cause of their condition to GMO foods, chemical additives, and many other aspects of modern life. In her book Zuk discusses how advances in technology (pre-GMO, pre-chemical revolution) such as breeding techniques developed specialized strains (of plants) or breed (of animals) that may no longer provide the nutrition their predecessors did. The key may not be the nutrition that our human body needs, rather the nutrition that our gut bacteria needs to keep a healthy balance!

For example Holstein cattle were breed to be the world’s best milk producers over the last 1000 years. The goal was volume of milk, not the content of the milk. If the milk had 50% more of certain (potentially unhealthy) fat types than low producing cattle species, no one knew it. The same happens with plants. In recent times, commercial plant species have been breed for characteristics such as shelf-life; again, the impact of slight shifts of composition are unknown. Is it possible some people with ME/CFS simply aren’t suited to some of the dietary changes of modern life (or for that matter the chemicals)?

Take our ability to eat the same fresh fruit and vegetables all year round — instead of just a few months of the year.

Conceptually, the general population believes all of this to be good. But looking at the role of gut flora in health, I find many questions are unanswered. If you have a fresh apple a day, you are supposed to be keeping the doctor away!  But some families of bacteria will find themselves very happy from the sugar and malic acid in apples,while others will not be happy; by eating an apple a day you may have actually upset the microbiome apple cart!

Studies have shown that the modern, high fat, high carbohydrate diet is hard on the gut flora.  Even after raw food has made its way through the acid bath of the stomach it still retains about 35% of it’s lactobacillus bacteria. What we eat makes a difference but now  instead of seasonal variations in gut flora (due to changes of diet), we end up with a single monotonic gut flora for the entire year. If this gut flora goes bad (as I believe is the case for CFS, IBS, Crohn’s and many other autoimmune conditions) then the historical mechanism that constrained this, goes away; ie we’re stuck with the bad flora.

A Change of Flora

So what is the bottom line? If a stable dysfunction of gut bacteria (microbiome) is the root cause of CFS (my working hypothesis), then fixing it is the way to remission. At present, I know of several ways:

  • Severe change of diet (likely the slowest)
  • The use of the right antibiotics (likely several families on antibiotics needed)
  • The use of the right probiotics (Mutaflor and Prescript Assist appears to be the best, any probiotic containing Lactobacillus Acidophilus is NOT the right probiotic IMHO)
  • The use of the right herbs (the herbs are natural antibiotics to certain species), the best ones appears to be Neem, Haritaki and Tulsi.

We’ll be getting into more on antibiotics, herbs/spices, diet and probiotics in future blogs. For now, the take away story is that  the situation is more complex than one would think.

(The term right is very important for probiotics, for example, CFS patients are low in all E.Coli species. Lactobacillus Acidophilus is usually deemed good, especially when dealing with bad E.Coli — unfortunately it does not know the difference between good and bad E.Coli..  On the other hand, Mutaflor is a probiotic composed of E.Coli Nissle 1917; this is the right probiotic (IMHO).)

(The information on Health Rising is produced by laymen and should not be construed as medical advice. Please consult with your doctor before making any changes to your treatment plan)

Comments
  1. Millions have high stress jobs, lousy diets, use tobacco and alcohol and do not get CFS! Yes, there is most likely a genetic component about the gut/immune system. If the gut is infected, or overloaded with pathogens, in many, it will harm the immune system, therein. If you look at the symptoms of Enterovirus, they match ME/CFS! Diet and probiotics over time will reduce the burden on the gut/immune system and recover to a degree but I believe if the tough primary pathogen is eliminated, recovery will be much faster. RP

    • Ken Lassesen says:

      Symptoms of CFS vary greatly and match many viral and non-viral infections. 10 years ago I was a believer in the single-pathogen cause. Today, my thinking is different…. many infections can cause the gut alteration…. and that infection may be eliminated/defated but the gut alteration remains…

      Thus you may have PCR testing for every proposed pathogen and be negative for all of them. On the flip side, the gut alteration will frequently “farm” passing infections that helps it survive. By farm, I mean producing chemicals that the infection will thrive on – because the infection will produce chemicals that the microbiome will thrive on. Mutual support.

      There is no way to “prove” either way. There are several studies of different acute infections that resulted in a 4-8% of those infected not recovering after the infection is defeated. Post-Infection Fatigue Syndrome is sometimes applied to this condition.

  2. Mog says:

    What is the anti-coagulant you use and where do you acquire it?

    • Ken Lassesen says:

      I will give a list of them in a future post, as well as explanation of what the issues in selecting them are.

      The one’s that I use (because I have a Prothrombin 20210 A/G defect) are turmeric (the kitchen spice) 2-4 gms/day, piracetam (2-4 gm), nattokinenase, lumbrokinease — to break down fibrin.

      80-90% of CFS patients have inherited/genetic coagulation defects. Which defect determines what type of treatment is needed….

  3. Thomas says:

    I did a fecal transplant from a fully healthy and screened donor. It didnt result in a recovery, only made me worse. In fact, i am considering going on 3 days on vancomycin to destroy whatever it did to me and try and reverse the procedure.

    • Ken Lassesen says:

      Thomas, the literature states that best results are obtained from blood relatives, the closer the better. DNA and gut bacteria are closely connected. A non-blood related donor may create the same situation that “non-matched organ transplants” have — rejection, open warfare between two populations of microbiome.

      I know someone that would love to try a fecal transplant — but the closest “healthy” family member is just 1/16th of the same DNA. Everyone closer have autoimmune or digestive issues.

      • Thomas says:

        Hi Ken, thanks for the reply. I wish I knew that before, or that my doctor told me that before suggesting I do one. Do you think a short course of vancomycin might be able to reverse the effects and bet things back to the way they were before the FT??

        Would love to know what you think i might be able to do about it…

        • Not medical advice, but assuming you are living in the US, not close to the Canadian Border, I would suggest a bottle of Prescript Assist as a starting point. See

          http://atomic-temporary-42474220.wpcomstaging.com/2013/01/07/508/

          for a list of the species in it.

          Start with 1/day and work up the dosage.

          Expect radical changes of stools and some possible discomfort.

          IMHO, it is more likely to be successful then a course of any single antibiotic, and likely healthier (adding good microbiome instead of flattening all microbiome: reminds me of the story Jesus told of tossing out a demon from a house, and then seven worst demons came to occupy it…. ).

          Pulse … i.e. no more than 10-14 days on and then take a 2-4 week break.

          • Thomas says:

            Thanks Ken. I live in Canada but apparently there are some websites that will ship it within Canada. I will give it a shot as per your pulsing recommendation. I still might do the 3 day course of vancomycin first then start on the prescript assist probiotic. I had IBS long before i ever had MECFS so hopefully this will help!

            Also, perhaps another FT (from my very healthy brother) would be a good choice to reverse the bad one if all else fails. What do you think?

            Again, i appreciate the responses. Thank you, kindly.

          • Thomas, our experience is that often doing two things at the same time do not result in each re-enforcing each other, rather, they partially neutralized each other.

            My thinking is that it better to dislodge the bad microbiome by good microbiome (“pro-biotics”) then to kill all of the microbiome. Thus, if I was in this situation I would talk with my health professional about:

            1) Two weeks of Prescript Assist (increasing dosage slowly)

            2) 1 week break

            3) Two weeks of Mutaflor (increasing dosage slowly)

            4) 1 week break

            Then re-evaluate — if significant improvement, repeat, otherwise….

            Base on degree of my own response, I would consider a course of Haritaki and Neem (Indian spices) after that (slowly increase dosage to a max of 5 gm/day) before going to conventional antibiotics (I have done lots of antibiotics — so it is not a bias against them, just the degree of response that I have seen from each).

          • Thomas says:

            Got it. I will go by your advice and do that course of action first. What is interesting is that my Genova CDSA looked better after the FT than before as far as healthy bacteria goes, So at least on paper it worked, but i didnt feel any better. Perhaps my decline was completely unrelated. I always had high e coli but i will get some mutaflor anyways. I am more excited by the prescript-assist though and what it can do. Thank you.

  4. Dusty Girl says:

    Mutaflor currently not available in the US pending some FDA reclassification.

    • Correct. FDA deems it to be a drug. Even with a US prescription for it, you could not get it. Mutaflor is very temperature sensitive. In Canada they send it express packed in a large foam chest loaded with ice packs. It is always sent directly from the Canadian distributor directly to the shipping address.

      On the other hand, Prescript Assist is not temperature sensitive and available in the US — it’s the next best choice for US residents.

      • Cort Johnson says:

        Just what I was going to ask. What are the alternatives in the US. How close is Prescript Assist to Mutaflor. I guess we’ll get into his later but what makes up a really good probiotic?

        • Prescript Assist and Mutaflor have ZERO bacteria families in common. A good probiotics is one that has been repeatedly found to be very effective for IBS in published studies found on PubMed (Prescript Assist has) or other IBD/IDS (Mutaflor has).

          With CFS — there is a gotcha, there should be no species known to reduce E.Coli (since we are known to be low in that). In general, (apart from L.Reuteri), I avoid probiotics containing Lactobacillus of any species.

          I am constantly looking for additional “unusual” probiotics (may require import from outside of the US — there are some interesting ones in Japan and Korea) that matches that criteria.

  5. Tammie says:

    My gut was fine until I tried probiotics (have tried them two different times, using different kinds)……going on them was hell & it wasn’t herxing, bc I stayed on them long enough for that to have stopped…..and ever since being on them, my gut has become progressively worse (bad gut reactions are not the only thing that was bad abt being on them, by any means, but they are the only bad reactions that never got better after stopping them)..

    …..at this pt there are absolutely ZERO foods that I can eat w/o either throwing up, having diarrhea, and/or having the food just sit in my GI tract & not move and my stomach blow up like I am 6 months pregnant (& my weight also goes up a lot almost immediately when this happens, even if I have only eaten a very small amt of food….I went up 4 clothing sizes in 6 days while throwing up every day & not eating that much food)

    I am now starving during the day & then eating the foods that have the least bad reactions when I know that I am not goign to be going anywhere or around anyone (not that I go anywhere much, but if I know I have to, I won’t eat so that I can avoid getting a bad reactions while I am out)

    • You will note that I state the any probiotics containing Lactobacillus as being the wrong choice for CFS. This has been expressed by a few MD’s at CFS conference is mild terms of “yet to see any benefit”. If you purchase the probiotics in a health food store it is extremely likely they are mainly Lactobacillus.

      It sound like you have have UC or Crohn’s Disease or some form of IBD. If it is Crohn’s then studies have > 95% of the invasive species are E.Coli — often antibiotic resistant. Mutaflor has been found effective in Europe for Crohn’s — because it is more robust and out competes most of the bad E.Coli.

      I have seen an alternative protocol for Crohn’s have outstanding result over several weeks by rotating thru herbs that have been demonstrated in clinical studies to be effective against some species of E.Coli. These studies were done in India and China and are included on Pub Med.

      It was rotating weekly between items such as the following

      • Rheum officinale

      • Chitosan

      • Zingiber officinale

      • Punica granatum

      • Terminalia chebula

      • Withania somnifera

      • Epilobium angustifolium

      • Salvia Plebeia

      • Rosmarinus officinalis

      • Scutellaria baicalensis

      • Trianthema decandra

      • Quercus infectoria

      There was one Chinese study that reported that herbs for E.Coli often developed resistance if used too long… hence the need to continuously change the herbs(or antibiotics) being used…

      • Cort Johnson says:

        I;m glad there are alternatives because I think I had a bad reactions to probiotics as well. I won’t be able to tell until I try them again…but I had issues with dizziness. I don’t know how probiotics could cause that but I hadn’t started anything else. I always thought of probiotics as being rather mild but judging from some peoples reactions they’re not – which actually speaks to how powerful they can be.

        • Probiotics are bacteria. Bacteria can produce signaling chemicals that have been documented to alter the mind, re-activate prior virus, and recently have been found to manufacture their own virus. When you introduce foreign bacteria (i.e. probiotic) into your system — you will usually find them greeted as friends, enemies or don’t care.

          What the reaction is depends on your current, unique set of microbiome.

Sorry we do not write protocols…

Recently I was asked to write out my protocol — a protocol is a cookbook or recipe to follow.  All that I can give is really an approach.. to give a simple everyday example:

“Take a slab of flesh, add some alcohol and spices, let cook for a while and then serve.”

The flesh could be fish, beef, pork, lamb, snails or even grasshoppers! The alcohol could be wine (red, white, port, sherry, brandy etc), spices could be salt, pepper, chili peppers, etc.  Does the recipe create an excellent meal?  Well…. yes and no. Does my protocol result in remission? The same yes and no.

For CFS (and most IBD), the flesh is an assortment of different bacteria that varies from person to person. Alcohol are antivirals and antibiotics. Spices are supplements which may include real world herb and spices. “Let cook for a while” often means heat (discomfort aka die off, herx) which may occur in cycles…

According to the Literature

The following are from PubMed studies finding firm evidence of improvement

The following appears to help in some cases

  • Alpha Lipoic Acid
  • Ashwagandha
  • B12
  • Boswellia
  • Escherichia Coli Nissle 1917
  • Folate
  • FOS
  • Mastic Gum
  • Omega-3
  • Rosavin (Rhodiola)
  • Salt (Sodium Chloride)
  • Turmeric
  • Vitamin D (you want to get near the TOP of the normal range– to the point that your MD or ND asks you to stop supplements with some concern in their voice!)
  • Vitamin C

According to my recent experience

Note that I intentionally do not give dosages — for many spices, I will go up to 6 gm/day. Dosages should be decided in consultation with your medical professionals. Many items may cause die off. Some items do not get along with other items.

  • Haritaki
  • Neem
  • Tulsi
  • Prescript Assist
  • Lactobacillus Reuteri
  • Alpha Lipoic Acid
  • Ashwagandha
  • Boswellia
  • B12 and Folate Methyl versions may be more effective for some
  • Coenzyme Q10
  • Fish Oil (Omega-3)
  • Licorice (Glycyrrhiza): 2 8 gm/ day
  • Vitamin D: 10,000 to 20,000 IU/day until levels exceeded 50 ng/mL (125 nmol/L)
  • FOS should be taken with probiotics
  • FOS from rye is preferred (i.e. 100% Rye bread)
  • 85+% Chocolate (85%) (2–3 oz/day) (Good for morale!)
  • Goat Cheese (1 oz 3 times a day) or other Neu5gc sugar
  • Mutaflor (E. Coli Nissle 1917)
  • Lactobacillus Rhamnosus
  • Turmeric starting at 300 mg, increasing up to 8 gm
  • Bishop Weed (Ajwain Seeds)
  • Olive Leaf Extract
  • Monolaurin
  • Artemisia
  • Bromelain
  • EDTA
  • NAC (Acetylcysteine)
  • Serrapeptase
  • Nattokinase
  • Lumbrokinease